Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926673.1_cds_XP_016474649.1_66654
CDS Infomation

[gene=LOC107796407] [db_xref=GeneID:107796407] [protein=hydroxymethylglutaryl-CoA synthase-like] [protein_id=XP_016474649.1] [location=join(5493..5564,6651..6757,7165..7297,7689..7832,7943..8101,8245..8318,8400..8475,8577..8632,8724..8811,8928..9068,9162..9311,9420..9608)] [gbkey=CDS]
Sequence

ATGGCAGCTCAACCGAAGAATGTCGGAATTCTCGCCGTCGAAATTTACTTCCCTCCTACT
TGCCTCCCACAGGAAGCATTGGAGGCTCATGATGGAGCAAGCAAAGGAAAATACACAATT
GGTCTTGGACAAGATTGTATGGGCTTTTGCACTGAGGTTGAAGATGTTATATCAATGAGT
TTGACAGCAGTTACTTCCCTTCTGGAGAAGTATGAGATTGATCCTAAGCAAATTGGTCGT
CTCGAGGTCGGAAGTGAGACAGTCATTGATAAGAGCAAATCCATCAAAACATTCCTCATG
CAAATATTTGAGAAATGTGGAAACACTGACATTGAAGGAGTCGACTCAACTAATGCATGT
TATGGCGGAACTGCTGCATTGTTCAACTGCGTGAATTGGGTCGAGAGCTCTTCATGGGAT
GGACGCTATGGACTTGTTGTATGCACTGACAGTGCGGTCTATGCTGAGGGAGCTGCTCGG
CCAACTGGAGGAGCTGCAGCAATTGCTATGCTAGTAGGGCCGGATGCTCCTATTGTATTC
GAAAGCAAGATTAGAGCTAGCCATATGGCCCATGTCTATGATTTTTACAAGCCCATCCTC
GACAGTGAATATCCAGTGGTTGATGGAAAGCTTTCACAAACTTGTTATCTTATGGCACTT
GATTCTTGCTACAAGAGCTTATGCGATAAATACGAAAAACTGGAAGGCAAGCAGTTTTCG
ATTGCTGATGCAGCCTATTTTGTTTTCCATTCACCATACAACAAGCTTGTACAGAAGAGC
ACTGCTCGATTGATGTTCAATGACTTTATAAGGAATGCTAGTTCCATTGACGAGTCTACT
AAAGAAAAGCTTGCACCATTTTCATCCTTAACTGGTGATGAAAGTTATCAAAGCCGTGAT
CTTGAGAAGGTATCCTGGCAAGTGGCAAAACCATTTTACGATGAGAAGGTGAAACCAGCC
ACATTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCA
TCCCTTCTCCACAATAAACACAGTTCATTGGCTGGACAGCGAGTAATCTTGTTCTCTTAT
GGAAGTGGATTGACTGCAACAATGTTCTCATTAAGGCTTAATGAAGGTCAACATCCTTTT
AGCTTGTCAAACATTGCAGCTGTTATGAACGTTGATGAGAAATTGAAGTCGAGACACGAG
TTCACTCCTGAAAAATTCATCGAAACGATGCATATAATGGAACACAGATATGGTGGTAAG
GACTTTGTGACGAGCAAGGATTGCAGCCTTTTAGCACCGGGTACCTACTACCTCACAGAA
GTCGATTCGAAGTACAGAAGATTTTATGCCCAAAAATGTGCTGAGAATGGACTTGCCAAT
GGTCACTGA

Peptide Sequence

PEP ID

XP_016474649.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana tabacum]
Sequence

MAAQPKNVGILAVEIYFPPTCLPQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMS
LTAVTSLLEKYEIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNAC
YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGAARPTGGAAAIAMLVGPDAPIVF
ESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLMALDSCYKSLCDKYEKLEGKQFS
IADAAYFVFHSPYNKLVQKSTARLMFNDFIRNASSIDESTKEKLAPFSSLTGDESYQSRD
LEKVSWQVAKPFYDEKVKPATLIPKQVGNMYTASLYAAFASLLHNKHSSLAGQRVILFSY
GSGLTATMFSLRLNEGQHPFSLSNIAAVMNVDEKLKSRHEFTPEKFIETMHIMEHRYGGK
DFVTSKDCSLLAPGTYYLTEVDSKYRRFYAQKCAENGLANGH

Transcript Sequence

Gene sequence data has not been registered.